PhD students’ scientific papers

Marijana Mijaković

Scientific papers derived from doctoral research:

  1. Mijaković, M.; Kežić, B.; Zoranić, L.; Sokolić, F.; Asenbaum, A.; Pruner, C.; Wilhelm, E.; Perera, A., Ethanol-water mixtures: ultrasonics, Brillouin scattering and molecular dynamics. Journal of Molecular Liquids 2011, 164, (1-2), 66-73. (Number of citations: 33)
  2. Asenbaum, A.; Pruner, C.; Wilhelm, E.; Mijaković, M.; Zoranić, L.; Sokolić, F.; Kežić, B.; Perera, A., Structural changes in ethanol-water mixtures: Ultrasonics, Brillouin scattering and molecular dynamics studies. Vibrational Spectroscopy 2012, 60, (0), 102-106. (Number of citations: 14)

 

Nada Ilić

Scientific papers derived from doctoral research:

  1. Maravić, I. Šamanić, M Šprung, Ž. Fredotović, N. Ilić, J. Dragičević, J. Puizina, Broad-spectrum resistance of Pseudomonas aeruginosa from shellfish: infrequent acquisition of novel resistance mechanisms, Environ Monit Assess. 190(2):81 (2018) doi: 10.1007/s10661-018-6471-3
  2. Smrečki, O. Jović, B.M. Kukovec, E. Šimunić, S. Vuk, A. Skuhala, M. Babić, T. Rončević, N. Ilić, I. Kekez, D. Matković-Čalogović, Z. Popović, Copper (II) complexes with N- alkyliminodiacetamide ligands. Preparation, structural, spectroscopic and DFT studies and biological evaluation, Inorganica Chimica Acta 471 (2018) 521-529.
  3. T. Rončević, G. Gajski, N. Ilić, I. Goić-Barišić, M. Tonkić, L. Zoranić, J. Simunić, M. Benincasa, M. Mijaković, A. Tossi, D. Juretić, PGLa-H tandem-repeat peptides active against multidrug resistant clinical bacterial isolates, BBA Biomembranes 1859(2) (2017) 228-237. (Number of citations: 1)
  4. N. Ilić, M. Novković, F. Guida, D. Xhindoli, M. Benincasa, A. Tossi, D. Juretić, Selective antimicrobial activity and mode of action of adepantins, glycine-rich peptide antibiotics based on anuran antimicrobial peptide sequences, BBA Biomembranes 1828(3) (2013) 1004-1012. (Number of citations: 39)
  5. D. Juretic, D. Vukicevic, D. Petrov, M. Novkovic, V. Bojovic, B. Lucic,N. Ilic, A. Tossi, Knowledge-based computational methods for identifying or designing novel, non-homologous antimicrobial peptides, Eur. Biophys. J. 40 (2011) 371-385. (Number of citations: 34)

 

Sofia Pinto

Scientific papers derived from doctoral research:

  1. Pučić, M., Pinto, S., Novokmet, M., Knežević, A., Gornik, O., Polašek, O., Vlahoviček, K., Wei, W., Rudd, P. M., Wright, A. F., Campbell, H., Rudan, I., and Lauc, G. Common aberrations from normal human N-glycan plasma profile. Glycobiology 20 (2010), 970-975. (Number of citations: 32)
  2. Pinto, S., Vlahoviček, K. and Buratti, E., PRO-MINE: A Bioinformatics Repository and Analytical Tool for TARDBP Mutations. Human Mutation, 32 (2011): E1948–E1958. (doi: 10.1002/humu.21393) (Number of citations: 7)

 

Bernarda Lovrinčević rođ. Kežić

Scientific papers derived from doctoral research:

  1. Mijaković, M.; Kežić, B.; Zoranić, L.; Sokolić, F.; Asenbaum, A.; Pruner, C.; Wilhelm, E.; Perera, A., Ethanol-water mixtures: ultrasonics, Brillouin scattering and molecular dynamics. Journal of Molecular Liquids 2011, 164, (1-2), 66-73. (Number of citations: 33)
  2. Kežić, B.; Perera, A., Towards a more accurate reference interaction site model integral equation theory for molecular liquids. The Journal of Chemical Physics 2011, 135, (23), 234104-11. (Number of citations: 11)
  3. Perera, A.; Mazighi, R.; Kežić, B., Fluctuations and micro-heterogeneity in aqueous mixtures. The Journal of Chemical Physics 2012, 136, (17), 174516-10. (Number of citations: 18)
  4. Kežić, B.; Perera, A., Aqueous tert-butanol mixtures: A model for molecular-emulsions. The Journal of Chemical Physics 2012, 137, (1), 014501-12. (Number of citations: 35)
  5. Perera, A.; Kežić, B.; Sokolić, F.; Zoranić, L., Micro-heterogeneity in complex liquids (Chapter 10) In Molecular dynamics-studies of synthetic and biological molecules Wang, L., InTech, Rijeka, 2012.
  6. Kežić, B.; Perera, A., Revisiting aqueous-acetone mixtures through the concept of molecular emulsions. The Journal of Chemical Physics, 2012, 137, (13), 134502-6. (Number of citations: 15)
  7. Asenbaum, A.; Pruner, C.; Wilhelm, E.; Mijaković, M.; Zoranić, L.; Sokolić, F.; Kežić, B.; Perera, A., Structural changes in ethanol-water mixtures: Ultrasonics, Brillouin scattering and molecular dynamics studies. Vibrational Spectroscopy 2012, 60, (0), 102-106. (Number of citations: 14)
  8. Kežić, B.; Mazighi, R.; Perera, A., A model for molecular emulsions: Water and „weak water“ mixtures. Physica A: Statistical Mechanics and its Applications 2013, 392, (4), 567-582. (Number of citations: 6)
  9. Perera, A.; Kežić, B., Fluctuations and micro-heterogeneity in mixtures of complex liquids. Faraday Discussions 2013, 167, 145-158. (Number of citations: 12)

 

Marjan Krstić

Scientific papers derived from doctoral research:

  1. I. Fleischer, D. M. Popolan, M. Krstić, V. Bonačić–Koutecký, T. M. Bernhardt: ”Composition dependent selectivity in the coadsorption of H2O and CO on pure and binary silver-gold clusters”, Chem. Phys. Lett. 565, 74 (2013). (Number of citations: 14)
  2. S. M. Lang, S. U. Fortig, T. M. Bernhardt, M. Krstić, V. Bonačić–Koutecký: ”Gas-Phase Synthesis and Structure of Wade-Type Ruthenium Carbonyl and Hydrido Carbonyl Clusters”, J. Phys. Chem. A 118 (37), 8356-8359 (2014). (Number of citations: 1)
  3. S. M. Lang, T. M. Bernhardt, M. Krstić, V. Bonačić–Koutecký: ”The Origin of the Selectivity and Activity of Ruthenium-Cluster Catalysts for Fuel-Cell Feed-Gas Purification: A Gas-Phase Approach”, Angew. Chem. Int. Ed. 53 5467-5471 (2014). (Number of citations: 10)
  4. S. M. Lang, T. M. Bernhardt, M. Krstić, V. Bonačić–Koutecky: ”Water activation by small free ruthenium oxide clusters”, Physical Chemistry Chemical Physics 16 (48), 26578-26583 (2014). (Number of citations: 2)
  5. M. Girod, M. Krstić, R. Antoine, L. MacAleese, J. Lemoine, A. Zavras, G. N. Khairallah, V. Bonačić–Koutecký, Ph. Dugourd, and R. A. J. O’Hair: ”Formation and characterisation of the silver hydride nanocluster cation [Ag3H2((Ph2P)2CH2)]+ and its release of hydrogen”, Chemistry-A European Journal 20 (50), 16626-16633 (2014). (Number of citations: 8)
  6. S. Daly, M. Krstić, A. Giuliani, R. Antoine, L. Nahon, A. Zavras, G. N Khairallah, V. Bonačić-Koutecký, Ph. Dugourd, R. A. J. O’Hair: “Gas-phase VUV photoionisation and photofragmentation of the silver deuteride nanocluster [Ag10D8L6]2+ (L= bis(diphenylphosphino) methane). A joint experimental and theoretical study”, Physical Chemistry Chemical Physics 17 (39), 25772-25777 (2015) (Number of citations: 8)
  7. Ž. Sanader, M. Krstić, I. Russier-Antoine, F. Bertorelle, Ph. Dugourd, P.F. Brevet, R., Antoine, V. Bonačić-Koutecký; “Two-photon absorption of ligand-protected Ag15 nanoclusters. Towards a new class of nonlinear optics nanomaterials“, Physical Chemistry Chemical Physics, 18, 12404-12408, (2016) (Number of citations: 11)
  8. A. Zavras, G. N. Khairallah, M. Krstić, M. Girod, S. Daly, R. Antoine, Ph. Maitre, R. J. Mulder, S.A. Alexander, V. Bonačić-Koutecký, Ph. Dugourd and R. A. J. O’Hair: “Ligand-induced Substrate Steering and Reshaping of [Ag2(H)]+ Scaffold for Selective CO2 Extrusion from Formic Acid“, Nature Communication, 7:11746 (2016) (Number of citations: 11)
  9. M. Krstić, A. Zavras, G. N. Khairallah, Ph. Dugourd, V. Bonačić-Koutecký, R. A. J. O’Hair: “ESI/MS Investigation of Routes to the Formation of Silver Hydride Nanocluster Dications [AgnHn-2Lm]2+ and Gas-phase Unimolecular Chemistry of [Ag10H8L6]2+”, Int. J. of M. Spec. 413, 97–105, (2017) (Number of citations: 2)
  10. I. Russier-Antoine, F. Bertorelle, Ž. Sanader, M. Krstić, C. Comby-Zerbino, Ph. Dugourd, P.-F. Brevet, V. Bonačić-Koutecký, and R. Antoine: “Ligand-Core NLO-phores: a combined experimental and theoretical approach of the two-photon absorption and two-photon excited emission properties of small ligated silver nanoclusters”, Nanoscale, 9, 1221-1228, (2017) (Number of citations: 3)
  11. A. Zavras, M. Krstić, Ph. Dugourd, V. Bonačić-Koutecký, R. A. J. O’Hair: “Selectivity Effects in Bimetallic Catalysis: Role of the Metal Sites in the Decomposition of Formic Acid into H2 and CO2 by the Coinage Metal Binuclear Complexes [dppmMM'(H)]+”, ChemCatChem, 9, 1298 – 1302, (2017)
  12. F. Bertorelle, I. Russier-Antoine, N. Calin, C. Comby-Zerbino, A. Bensalah, S. Guy, Ph. Dugourd, P.-F. Brevet, Ž. Sanader, M. Krstić, V. Bonačić-Koutecký, R. Antoine, : “Au10(SG)10: A Chiral Gold Catenane Nanocluster with Zero Confined Electrons – Optical Properties and First-Principles Theoretical Analysis”, J. Phys. Chem. Lett., 8, 1979−1985, (2017) (Number of citations: 5)
  13. S. Daly, C. M. Choi, A. Zavras, M. Krstić, F. Chirot, T. Connell, S. Williams, P. Donnelly, R. Antoine, A. Giuliani, V. Bonačić-Koutecký, Ph. Dugourd, R. A. J. O’Hair: “Gas-Phase Structural and Optical Properties of Homo and Heterobimetallic Rhombic Dodecahedral Nanoclusters [Ag14-nCun(C≡CtBu)12X]+ Clusters (X = Cl and Br): Ion Mobility, VUV and UV Spectroscopy, and DFT Calculations”, J. Phys. Chem. C, 121 (20), 10719–10727, (2017) (Number of citations: 1)
  14. M. Krstić, Q. Jin, G. N. Khairallah, R. A. J. O’Hair, V. Bonačić-Koutecký: “How to Translate the [LCu2(H)]+ – Catalysed Selective Decomposition of Formic Acid into H2 and CO2 from the Gas Phase into a Zeolite.”, ChemCatChem, accepted manuscript, DOI: 10.1002/cctc.201701594

 

Željka Sanader

Scientific papers derived from doctoral research:

  1. Russier-Antoine I, Bertorelle F, Sanader Ž, Krstić M, Comby-Zerbino C, Dugourd Ph, Brevet P F, Bonačić-Koutecký V, Antoine R; Ligand-Core NLO-phores: a combined experimental and theoretical approach of the two-photon absorption and two-photon excited emission properties of small ligated silver nanoclusters. Nanoscale, 2017, 9, 1221-1228 (Number of citations: 9)
  2. Sanader Ž, Krstić M, Russier-Antoine I, Bertorelle F, Dugourd Ph, Brevet PF, Antoine R, Bonačić-Koutecký V; Two-photon absorption of ligand-protected Ag15 nanoclusters. Towards a new class of nonlinear optics nanomaterials. Phys. Chem. Chem. Phys., 2016, 18, 12404-12408 (Number of citations: 14)
  3. Russier-Antoine I, Bertorelle F, Hamouda R, Rayane D, Dugourd Ph, Sanader Ž, Bonačić-Koutecký V, Brevet PF, Antoine R; Tuning Ag29 nanocluster light emission from red to blue with one and two-photon excitation. Nanoscale, 2016, 8, 28922898 DOWNLOAD (Number of citations: 22)
  4. Girod M, Sanader Ž, Vojković M, Antoine R, MacAleese L, Lemoine J, Bonačić-Koutecký V, Dugourd Ph; UV Photo-dissociation of proline-containing peptide ions : Insights from molecular dynamics. J. Am. Soc. Mass Spectrom., 2015; 26(3): 432-443 DOWNLOAD (Number of citations: 16)
  5. Sanader Ž, Mitrić R, Bonačić-Koutecký V, Bellina B, Antoine R, Dugourd Ph; The nature of electronic excitations at the metal–bioorganic interface illustrated on histidine–silver hybrids. Phys. Chem. Chem. Phys., 2014; 16(3): 1257-1261 (Number of citations: 9)
  6. Sanader Ž, Brunet C, Broyer M, Antoine R, Dugourd P, Mitrić R, Bonačić-Koutecký V; Cation induced electrochromism in 2, 4-dinitrophenylhydrazine (DNPH): Tuning optical properties of aromatic rings. Chemical Physics Letters, 2013, 570, 22-25 (Number of citations: 2)
  7. Bellina B, Antoine R, Broyer M, Gell L, Sanader Ž, Mitrić R, Bonačić-Koutecký V, Dugourd Ph; Formation and characterization of thioglycolic acid–silver cluster complexes. Dalton Trans., 2013; 42(23): 8328-33 (Number of citations: 9)

 

Jadranko Batista

Scientific papers derived from doctoral research:

  1. Batista, J.; Vikić-Topić, D.; Lučić B.; The Difference Between the Accuracy of Real and the Corresponding Random Model is a Useful Parameter for Validation of Two-State Classification Model Quality. Croatica Chemica Acta, 2016; 89(4): 527-534

 

Martina Požar

Scientific papers derived from doctoral research:

  1. Požar, M.; Seguier, J.-B.; Guerche, J.; Mazighi, R.; Zoranić, L.; Mijaković, M.; Kežić-Lovrinčević, B.; Sokolić, F. & Perera, A. Simple and complex disorder in binary mixtures with benzene as a common solvent. Phys. Chem. Chem. Phys. (2015) 17(15), 9885-9898. (Number of citations: 17)
  2. Požar, M.; Lovrinčević, B.; Zoranić, L.; Mijaković, M.; Sokolić, F. & Perera, A. A re-appraisal of the concept of ideal mixtures through a computer simulation study of the methanol-ethanol mixtures. J. Chem. Phys. (2016) 145(6), 064509
  3. Požar, M.; Lovrinčević, B.; Zoranić, L.; Primorac, T.; Sokolić, F. & Perera, A. Microheterogeneity versus clustering in binary mixtures of ethanol with water or alkanes. Phys. Chem. Chem. Phys. (2016) 18, 23971-23979. (Number of citations: 6)
  4. Požar, M.; Kerasidou, A.; Lovrinčević, B.; Zoranić, L.; Mijaković, M.; Primorac, T.; Sokolić, F.; Teboul, V. & Perera, A. The microscopic structure of cold aqueous methanol mixtures. J. Chem. Phys. (2016) 145(14), 144502. (Number of citations: 5)
  5. Požar, M. & Perera, A. On the micro-heterogeneous structure of neat and aqueous propylamine mixtures: A computer simulation study. J. Mol. Liq. (2017) 227, 210-217. (Number of citations: 2)
  6. Požar, M. & Perera, A. On the existence of a scattering pre-peak in the mono-ols and diols. Chem. Phys. Lett. (2017) 671, 37. (Number of citations: 2)
  7. Požar, M. & Perera, A. Lifshitz phase: the microscopic structure of aqueous and ethanol mixtures of 1,n-diols. Phys. Chem. Chem. Phys. (2017) 19, 14992.
  8. Požar, M. & Perera, A. Evolution of the micro-structure of aqueous alcohol mixtures with cooling: a computer simulation study. J. Mol. Liq. (2017) 248, 602-609.

 

Tomislav Rončević

Scientific papers derived from doctoral research:

  1. T. Rončević, G. Gajski, N. Ilić, I. Goić-Barišić, M. Tonkić, L. Zoranić, J. Simunić, M. Benincasa, M. Mijaković, A. Tossi, D. Juretić, PGLa-H tandem-repeat peptides active against multidrug resistant clinical bacterial isolates, Biochim. Biophys. Acta BBA – Biomembr. 1859 (2017) 228–237. doi:10.1016/j.bbamem.2016.11.011. (Number of citations: 1)
  2. M. Kozić, D. Vukičević, J. Simunić, T. Rončević, N. Antcheva, A. Tossi, D. Juretić, Predicting the Minimal Inhibitory Concentration for Antimicrobial Peptides with Rana-Box Domain, J. Chem. Inf. Model. 55 (2015) 2275–2287. doi:10.1021/acs.jcim.5b00161. (Number of citations: 4)

 

Marina Musa

Scientific papers derived from doctoral research:

  1. Mačak Šafranko, Ž., Balog, T., Musa, M., Tartaro Buljak, I., Sobočanec, S.; The effect of 17β-estradiol on sex-dimorphic cytochrome P450 expression patterns induced by hyperoxia in the liver of male CBA/H mice. Mol Cell Biochem (2016); 421(1-2):183-91. (Number of citations: 1)
  2. Perić, M., Bou Dib, P., Dennerlein, S., Musa, M., Rudan, M., Lovrić, A., Nikolić, A., Sobočanec, S., Mačak, Ž., Raimundo, N., Kriško, A.; Crosstalk between cellular compartments protects against proteotoxicity and extends lifespan. Sci Rep (2016); 6: 28751. (Number of citations: 6)
  3. Musa, M., Radman, M., Kriško A.; Decreasing translation error rate in Escherichia coli increases protein function. BMC Biotechnol (2016); 16 (1): 28.
  4. Perić, M., Lovrić,A., Lovrić, Musa, M., Bou Dib, P., Rudan, M., Nikolić, A., Sobočanec, S., Mikecin, A., Dennerlein, S., Milošević, I., Vlahoviček, K., Raimundo, N., Kriško, A.; TORC1-mediated sensing of chaperone activity alters glucose metabolism and extends lifespan. Aging Cell (2017); 16: 994-1005.

 

Matea Perić

Scientific papers derived from doctoral research:

  1. Perić, M., Bou Dib, P., Dennerlein, S., Musa, M., Rudan, M., Lovrić, A., Nikolić, A., c Sobočanec, S., Mačak, Ž., Raimundo, N., Kriško, A.; Crosstalk between cellular compartments protects against proteotoxicity and extends lifespan. Sci Rep (2016); 6: 28751. (Number of citations: 6)
  2. Perić, M., Lovrić, A., Lovrić, Šarić, A., Musa, M., Bou Dib, P., Rudan, M., Nikolić, A., Sobočanec, S., Mikecin, A., Dennerlein, S., Milošević, I., Vlahoviček, K., Raimundo, N., Kriško, A.; TORC1-mediated sensing of chaperone activity alters glucose metabolism and extends lifespan. Aging Cell (2017); 16: 994-1005.
  3. Nikolić, A.; Perić, M.; Ladouce, R.; Mikecin, A.; Martin, F.A.; Kralj, M.; Kriško, A.; Radman, M.; Death by UVC Light Correlates with Protein Damage in Isogenic Human Tumor Cells: Primary Tumor SW480 versus its Metastasis SW620. Journal of Proteomics & Computational Biology (2572-8679) 2 (2016), 1; 1-12

 

Lucija Krce

List of scientific papers available at personal Google scholar profile

Ivana Gunjača

List of scientific papers available at personal Google scholar profile

Ana Bedalov

List of scientific papers available at personal Google scholar profile